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miArrest™ miRNA Inhibitors

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Introduction
microRNA (miRNA) inhibitors block miRNA regulation of target gene expression. They are designed and optimized for miRNA loss of function study. GeneCopoeia offers miArrest miRNA inhibitors as vector-based expression clones or synthetic oligonucleotides.
Vector-based expression clones are available in lentiviral and non-viral vectors. miRNA inhibitor clones bind specifically to their target miRNAs allowing transient as well as stable suppression of the target gene. The choice of H1 or U6 promoter allows constitutive expression of inhibitors in virtually all types of mammalian cells.  

 Advantages

Full coverage
  • All known human, mouse and rat miRNAs in the miRBase covered.

Flexible delivery systems

  • Lentiviral vectors allow efficient transduction and stable integration into the host genome of non-dividing and difficult to transfect cells target cells
  • Non-viral vectors allow either transient or stable transfection

Advanced and reliable design

  • Expression cassettes have been designed using a proprietary algorithm and tested rigorously by carefully designed experiments

Superior performance

  • Superior potency, long lasting inhibition and extremely low cell toxicity compared to other chemically synthesized miRNA inhibitors (see table 1)
  • Choices of H1 or U6 promoter allow constitutive expression of inhibitors in virtually all mammalian cell types.

High-throughput compatible

  • Quick and easy assay format
  • High sample number compatible
 
 
Figure 1. Data showing the effect of miArrest miRNA inhibitor clone in a dose-dependent manner A miR-125a inhibitor expression plasmid (GeneCopoeia HmiR-AN0094-AM01) was transfected into HEK 293 cells with 1) a miR-125a precursor expression plasmid (GeneCopoeia HmiR0309-MR03) and 2) a miRNA target sequence expression clone expressing LIN28, a known target gene for miR-125a (GeneCopoeia HmiT019205-MT02: 3′-UTR sequence of LIN28 in gaussia luciferase-alkaline phosphatase dual reporter expression vector). Both the GLuc activity and an internal control AP activity were determined 24 hours post-transfection. The activity ratio of GLuc to AP was set to 1 for the single transfection sample with LIN28 3′-UTR target sequence expression clone (left-most bar), against which the activities of other samples were normalized. The result shows that mir-125a suppressed the luciferase activity from the Gluc-LIN28-3′-UTR clone by more than 70% (Bar 2 from left). This suppression effect was blocked by the introduction of varying amount of miArrest™ inhibitor clone against miR-125a in a dose-dependent manner. At the highest dose, the reporter GLuc activity is higher than the control (right-most bar). This could be attributed to the fact that this vector-based inhibitor may have blocked the regulatory effect of endogenous miR-125a, which would result in increased translational activity of GLuc-LIN28-3′-UTR transcript.
 
Vector-Based Inhibitors Synthetic 2′-OMe Inhibitors LNA Inhibitors
Inhibition +++++ ++ ++
Specificity +++++ +++ +++
Stability +++++ + +++
Durability Long term Transient Transient
Cell Toxicity +
Delivery to resting and hard-to-transfect cells +++++
Table 1. Comparison of vector-based inhibitors vs. synthesized miRNA inhibitors
 
 

Figure 2. Simplified mechanism of action for vector-based miRNA inhibitors

miRNA inhibitor constructs bind specifically to their target miRNA upon transduction into cells. The post-transcriptional processing causes formation of an entrapping structure that attracts and binds to two molecules of the intended miRNA.

This in turn prevents the binding of endogenous miRNA to target mRNA, thus inhibiting the effect of miRNA on target gene and facilitating enhanced target gene expression (figure 3).

A unique vector design ensures maximum inhibition with specificity and long-lasting stability while keeping off-target effects to a minimum.

 

Lentifect™ Special Collection Lentivirus — Low Price and Fast Delivery

GeneCopoeia's special collection of lentivirus is available at a low cost and fast delivery to meet your experimental budget and time requirements.

Search your lentivirus

This collection offers genome-wide ORF cDNA and all known miRNA and miRNA inhibitors in a chosen set of vectors.

  • Genes: — Human ORF cDNAs in OmicsLink™ pReceiver-Lv105 lentiviral vector
  • miRNAs: — All known human, mouse and rat miRNAs in miExpress™ pEZX-MR03 lenviral vector
  • miRNA inhibitors: — All known human, mouse and rat miRNA inhibitors in miArrest™ pEZX-AM03 lentiviral vector
  • Cancer-related miRNAs and inhibitors: — Human cancer-related miRNAs and inhibitors in pEZX-MR03 and pEZX-AM03 lenviral vectors respectively

The delivery time is around 2-4 weeks. For lentiviral particles not covered in this collection, please check out our Custom-made and pre-made lentivirus.

 

 

Related Products

Yeast Two Hybrid Expression Clones

For high throughput studying protein-protein interaction

More than 40,000 individual full length ORFs of human and mouse genes are available in OmicsLink™ AD-ORF fusion and BD-ORF fusion expression vectors, enabling high-throughput studies of protein-protein interactions in vivo.

  • For two-hybrid analyses, the gene encoding "bait" protein is cloned into OmicsLink™ pBD vector resulting in a fusion protein with the GAL4 DNA binding domain. The gene encoding the "target" protein is cloned into OmicsLink™ pAD, resulting in fusion with Gal4 transcription activation domain.
  • The two plasmids are co-transformed into yeast cells. If the "bait" and "target" proteins interact, the Gal4 binding and activation domains are brought together, which in turn activates the lacZ reporter gene. Therefore, the ability of the "bait" and "target" to interact can be determined based on the phenotypes of the transformed yeast cells.

ORF Expression Clones are also available in 100+ expression vector systems with different promoters and various N- or C-terminal tags: His, GST, MBP, eGFP, eYFP, AviTag™, HA, Flag, SUMO, and more.

 

 

OmicsLink™ shRNA Clone Collections

Introduction OmicsLink shRNA clone collections include lentiviral and non-viral vector-based shRNA constructs against genome-wide human, mouse and rat genes. shRNA of varying lengths (19 to 29 bases) were designed using a proprietary algorithm to make shRNA expression constructs that have high knockdown efficiency with minimal off-target effect.

Guaranteed shRNA knockdown

A set of three expression constructs and a scrambled control is offered against every target gene with the guarantee that at least one of the three will have a knockdown effect of 70% or more on corresponding gene expression as determined by qRT-PCR, otherwise the constructs will be replaced one time free of charge. For more about our guaranteed shRNA knockdown, refer to warranty and cancellation policy here.

All cell types covered

Lentiviral and non-viral vector options allow the transfection or transduction of shRNA into difficult-to-transfect cells as well as more conventional cell lines.

Promoters of your choice

shRNA is driven by pol III promoters (H1, U6) or pol II promoters (CMV, EF1a, CAG and CBh), both with great knockdown efficiency. Request a quote for pol II promoter-driven shRNA lentivirus or AAV services. pol III promoter-driven shRNA pol II promoter-driven shRNA

Multiple delivery formats

shRNAs are delivered as 3 individual constructs of 5 µg purified plasmid and a separate scrambled control plasmid. Lentivirus and AAV for shRNA are also available.

Markers and reporters

Vectors with mCherry or eGFP reporter genes for monitoring transfection or transduction efficiencies. Stable cell selection with puromycin marker.

Fully sequenced expression cassettes

Expression cassettes of all shRNA clones are fully sequenced including the promoter, sense and antisense target sequences, hairpin, terminator, and other linker sequences.

Figure 1. Lentiviral and non-viral expression vector-based shRNA clones

RNA Interference (RNAi) solution

GeneCopoeia RNAi solution include tools for your gene knockdown, gene regulation, and target validation studies. Tools for transient and stable transfection, and transduction (infection) into a broad range of cell types including the difficult-to-transfect, neuronal, primary as well as conventional dividing cells are available.

shRNA – gene knockdown

Lentiviral and non-viral vector-based clones (plasmids) for genome-wide human, mouse and rat

 

 

 

Precursor miRNA – miRNA overexpression

Lentiviral and non-viral vector-based clones (plasmids) for all known human, mouse and rat miRNA

 

 

 

miRNA inhibitors – miRNA knockdown

Lentiviral and non-viral vector-based clones (plasmids); and synthetic oligonucleotides for all known human, mouse and rat miRNA

 

 

 

miRNA 3’ UTR targets – target gene validation

Luciferase vector-based clones (plasmids) for genome-wide human, mouse and rat genes

 

 

 

miRNA qRT-PCR – miRNA detection and quantification

Validated miRNA specific primers and SYBR® Green based detection kits

 

 

 

Vector-based shRNA or microRNA RNAi mechanism

Figure 1: Vector-based shRNA or microRNA RNAi mechanism