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qRT-PCR tools for gene and microRNA profiling

GeneCopoeia offers comprehensive qRT-PCR tools, including first-strand cDNA synthesis kits, qPCR mix, RT-PCR detection kits, validated qPCR primers and qPCR arrays for researchers to study gene and microRNA (miRNA) expressions.

Category Gene Expression Detection/Profiling miRNA Expression Detection/Profiling Description
qRT-PCR kits All-in-One™ first-strand cDNA synthesis kits All-in-One™ miRNA first-strand cDNA synthesis kits Reverse-transcribe mRNAs or miRNAs into cDNA templates
All-in-One™qPCR mix All-in-One™qPCR mix Quantify reverse-transcribed cDNA templates using high-fidelity, hot-start DNA polymerase, and optimized buffer
  All-in-One™ miRNA qRT-PCR detection kits Include both RT and PCR reagents. Quantify mature miRNAs fast and accurately
qRT-PCR primers All-in-One™ qPCR primers
All-in-One™ miRNA qPCR primers
Experimentally-validated qPCR primers for highly specific and sensitive detection
qPCR arrays   96-well or 384-well qPCR arrays containing pre-defined or customized groups of qPCR primers (fully validated) to detect expression profiles of genes or miRNAs in various tissues and cells
Brochures and product profiles product profile  

 

Related Products

CoolCutter™ SUMO Protease — ideal for removing native or recombinant SUMO tags

CoolCutter™ SUMO Protease
CoolCutter™ SUMO Protease
Positive Control
Positive Control

CoolCutter™ SUMO Protease Positive Control

Price: $215.00 $130.00
Catalog#:
  • PE001
  • PE001-04
Size: Positive Control
Qty:
Manual:
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The Small Ubiquitin MOdifier (SUMO) gene fusion system allows for the efficient removal of SUMO tags. The CoolCutter™ SUMO Protease product is a mixture of recombinant human and mouse SUMO proteases which delivers superior SUMO cleavage activity with both the native sumoylated proteins and the SUMO tag in recombinant SUMO fusion proteins. The CoolCutter™ enzyme recognizes the tertiary structure of SUMO rather than an amino acid sequence for a clean release of the desired peptides. A high activity in a wide range of pH, salt and detergent concentrations makes CoolCutter™ SUMO protease highly suitable for recombinant protein expression and purification. CoolCutter™ SUMO protease can cleave any protein that is fused to the C-terminus of SUMO except for fused proteins beginning with proline.Cleavage efficiency of CoolCutter SUMO Protease is low for those SUMO-fused proteins that begin with luecine, lysine or valine. CoolCutter™ SUMO Protease is ideal for use with OmicsLink™ Expression-Ready Clones, particularly the bacterial pReceiver-B12 and pReceiver-B13 vectors.  

CoolCutter™ SUMO Protease and no-gap cloning

CoolCutter™ SUMO protease allows construction of full-length ORF cDNA clones that produce proteins without spacer peptides between the tag and desired proteins.
Other proteases contain cleavage sites resulting in unwanted spacer peptides

CoolCutter SUMO protease generates full- length protein without spacer peptides

Figure 1. Western blot showing cleavage efficiency of CoolCutter™ SUMO protease at 16°C and 25°C for 3-, 5-, 10-, 20- and 40-minute incubations.
 

Single-Strand cDNA Synthesis Kit

Description:
The single strand cDNA synthesis kit is designed for the purpose of producing first strand cDNA using polyA RNA(or total RNA) as templates. The synthesized cDNA can be used as templates in PCR to detect gene expression. It is a complementary product of the AmpArray product. The first strand cDNA can also be used to generate the gene fragment for gene cloning.

The components included in the kit:

5x M-MLV reaction buffere 200µl
Oligo dT(0.5 µg/µl) 20µl
dNTP mix (2.5 mM each) 200µl
M-MLV reverse transcriptase 5,000/25µl

Protocol:
The protocol for the kit will be shipped together with all components



Price:

Cat. No. First Strand cDNA synthesis kit (10 reaction) Qty Price($USD)
SSSK-01 Including following componants:
1. 5x first strand buffer
2. Oligo dT
3. dNTP mix
4. Reverse Transcriptase MMLV
1 55.00
2 105.00
4 248.00
10 465.00
20 880.00

miTarget™ 3′ UTR miRNA Target Clones

Introduction

GeneCopoeia offers genome-wide human, mouse and rat microRNA (miRNA) 3′ UTR target clones in mammalian expression vectors. miRNA 3′ UTR target clones can be used for miRNA target identification and functional validation of predicted targets, or to study the regulatory effect of miRNAs on target genes.

3′ UTR sequences were obtained from public domain gene sequence databases and inserted downstream of a secreted Gaussia luciferase (GLuc) reporter gene, which is expressed under control of the SV40 promoter in mammalian cells. A chimeric mRNA is transcribed consisting of the GLuc and a 3′ UTR target sequence. Thus, the study of mRNA-miRNA target interaction can be easily performed with a live cell assay for GLuc using only 10 μl of the cell culture medium.

Besides using GLuc as the miRNA 3′ UTR target reporter, a secreted Alkaline Phosphatase (SEAP) reporter driven by a CMV promoter is also cloned into the same vector (pEZX-MT05) and serves as the internal control. The dual-reporter vector system enables transfection normalization for accurate across-sample comparison.

In addition to the GLuc/SEAP dual-reporter vector system, a firefly/Renilla Duo-Luciferase reporter vector (pEZX-MT06) is also available.

 

 

mirna target with luciferase reporter

Figure 1. How 3’UTR clone works

 

mirna target with luciferase reporter

 

Figure 2. Vector backbone of miTarget miRNA 3′ UTR target clones

 

Figure 3. The inhibitory effect of miRNA on a 3′ UTR target sequence expression clone

LIN28 is the known target gene for miR-125a. HEK 293 cells were transfected with LIN28 3′ UTR target sequence expression plasmid alone (left bar) or co-transfected with miR-125a precursor expression plasmid (right bar). Both the GLuc activity and an internal control SEAP activity were determined 24 hours post-transfection. The activity ratio of GLuc to SEAP was set to 1 for the single transfection sample with LIN28 3′-UTR target sequence expression clone (left bar), against which the activity of the co-transfection sample was compared to. The result shows that miR-125a suppressed the luciferase activity from the GLuc-LIN28-3′-UTR clone by more than 70% (right bar).

Advantages

Live cell assays

  • Naturally secreted GLuc reporter
  • No lysis of the cells is necessary
  • Save samples, reduce variations, and simplify experiments

Dual-reporter vector system

  • Enables transfection normalization for accurate across-sample comparison

High-throughput compatible

  • Group study or high sample number compatible

High sensitivity

  • GLuc is 1000-fold more sensitive than firefly or Renilla luciferase

Convenience

  • All 3′ UTR target clones are ready to use

 

 

miExpress™ Precursor miRNA Expression Clones

*Promotions are valid in the US & Canada only. For international customers, please contact your local distributors. Discounts are not valid on previous purchases and cannot be combined with additional discounts.

Introduction
MicroRNAs (miRNAs) are small, non-coding, single-stranded RNA molecules found in eukaryotic organisms. They are highly conserved and usually 21-23 nucleotides in length. miRNAs are involved in almost all cellular functions and regulate gene expression by binding to the 3′ untranslated regions (3′ UTRs) of targeted mRNAs. Irregularities in miRNA-regulated gene expression have been found to be associated with cancers, cardiovascular disorders and a variety of other diseases.
GeneCopoeia offers miExpress™ precursor miRNA expression clones in lentiviral and non-viral vectors with eGFP reporter gene. Hairpin precursor miRNA of approximately 150 nucleotides is cloned into lentiviral or non-viral vectors for delivery in virtually all cell types. Clone sets are also available.

Search precursor miRNA clones and synthetic miRNA mimics

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Advantages

 Full coverage

  • All known human, mouse and rat miRNAs in the current miRBase covered.

Flexible delivery systems

  • Lentiviral vectors allow efficient transduction and stable integration into the host genome of non-dividing and difficult to transfect cells target cells
  • Non-viral vectors allow either transient or stable transfection

Optimized expression cassettes

  • Expression cassettes have been fully sequenced and optimized for high miRNA expression of precursor miRNA and maturation of miRNA inside cells

Selection markers and reporters

  • An eGFP reporter is designed to monitor transfection or transduction efficiency
  • Neomycin or Puromycin selection marker enables stable cell line selection
Figure 2: Role of precursor miRNA and miRNA 3′ UTR target clones in miRNA regulation studies